Python_MyoVision

View project on GitHub

Segment a test image into test blobs

  1. Open a command prompt and change the directory to that containing your Python code
    • It’s probably
      `c:\users\your_username_here\GitHub\Python_Myovision\Python_code
    • If you’re stuck, check this introductory example
  2. Type
    python py_vision.py find_blobs "..\demos\example_C\configuration_data\configuration_data.xml"
    and press enter

  3. Within a few seconds, you should see lots of status updates in the command window

  4. Once the program has finished, look in ..\demos\example_C\results. You should see:
    • annotated_overlay.png - an image file showing labeled blobs
    • blob_metrics.xlsx - an Excel file showing metrics for each labeled blob
    • a folder called blobs, which contains >800 individual images