3state_with_SRX
This scheme is similar to that described in PMC6084639. See the publication for additional details.
See ramp_3 for an example simulation using this scheme.
Myosin heads transition between an OFF, an ON, and a force-generating state. Binding sites on actin switch between states that are unavailable and available for myosin heads to attach to.
The fluxes are as defined in PMC6084639 except that
J4 = k_4_0 + (k_4_1 * x4)
The model parameters that need to be defined in the model file file are:
- k_1
- k_force
- k_2
- k_3
- k_4_0
- k_4_1
- k_on
- k_off
- k_coop